PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca47145.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family NAC
Protein Properties Length: 302aa    MW: 35002.4 Da    PI: 5.1357
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca47145.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.73.6e-47111373128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 
                 pGfrF+Pt+eelv++yLk+ v +k++++ ++i  ++iy+++PwdLp  ++ +e+ewyfF++rd+k++ g ++nr+t++g+Wkatg+d++++s    +++
  Dca47145.1  11 PGFRFKPTEEELVNFYLKNTVYEKRMHV-DIIGFLNIYQHDPWDLPGLATIGEREWYFFVPRDRKSSYGGKPNRTTEHGFWKATGSDRKIFSMsePKRV 108
                 9***************************.99***************8777899*************************************998666778 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +gl+ktLvfy+grap+g+ktdWvm+eyrl
  Dca47145.1 109 IGLRKTLVFYNGRAPRGSKTDWVMNEYRL 137
                 ***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100552.5459155IPR003441NAC domain
SuperFamilySSF1019416.02E-5310155IPR003441NAC domain
PfamPF023654.5E-2511137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDENGANFEL PGFRFKPTEE ELVNFYLKNT VYEKRMHVDI IGFLNIYQHD PWDLPGLATI  60
GEREWYFFVP RDRKSSYGGK PNRTTEHGFW KATGSDRKIF SMSEPKRVIG LRKTLVFYNG  120
RAPRGSKTDW VMNEYRLPDN CVLHKDIVLC KIYRKATSMK ELEQRAAKEE EETTLQKSLI  180
VTPCPTSPVS SSNETTSSIN NDFGQLQDFL PSSFYTTSTC DDHQMTLKEE KFEENFEDVV  240
NNFDVGRSNR IQLPFEKDGL QELQVSKAGI DWVQDPFSLQ LCSPWFENIL NFNSPTLISQ  300
LL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-441115517168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010690266.11e-128PREDICTED: NAC domain-containing protein 67
TrEMBLA0A0K9QXX31e-129A0A0K9QXX3_SPIOL; Uncharacterized protein
STRINGGLYMA11G10230.11e-107(Glycine max)
STRINGGLYMA12G02540.11e-107(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.16e-94NAC domain containing protein 36